Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853759.1_cds_XP_016512356.1_25008
CDS Infomation

[gene=LOC107829400] [db_xref=GeneID:107829400] [protein=rust resistance kinase Lr10-like] [protein_id=XP_016512356.1] [location=join(104160..104847,104942..104968,105052..106163)] [gbkey=CDS]
Sequence

ATGCTTAGTAAATCTCTAGTAAGAGTTTTAGAAATGTCCATCTTTACATCTCTCTTATTT
TTCTTGGTATTTTGCCCATTGTTAAGTTTAGGAGACAGACTAGAGGGTTGTGAGGATTCT
TGGTGCAAAAATGATGGCCCTATAATTCATTTTCCATTCAGGCTCAGAAATCAACCAAAA
CATTGTGGCTATCCTGGTTTTGAACTACAGTGTAACAATCAAAAGGACACCATCCTCGAG
CTTCCCTTTTCTGTTCACTTCATTGTTGAAGAAATTGATTATATCTCGCAGCAAATTCAC
CTTTATGATCCTAACGAGTGCATAATAGCCAAGCTATCAAAACTTAATTTATCACAATCT
AATTTCAAAAATGTCGAAGATCCCACAGCCCTATTCAATTGTTCTGTACCATATGATTAC
GGTATCGTAGTTCCTTGTCTTGGTTCTTCTGGATACCAAGTTTATGCTGTTTCTCCGACC
ATTATCCTCCACCTATTCTTGACTGGGCCTTGTACAAAAATTCATCAGTACCCATACTCA
CAGTCAACATTTCTTGAGAACAGGCTGCAGCTGAATTGGCCTGTACCACTCTGTGGAAAC
TGTGAGTCCAATGGAATGGATTGTGGTTTCATGGATAGAACTAAGCTATTGGAAACTCAT
TGTTTCAATCGAACTATGACCCAAAAAGGTATTACTAAACAGCCCTTAGTTGCAGGTGTC
ATTTTAGGTGCAGCTCTTGTTTGCATTATTATTTTCTCATTTCATCAGCTATATTTGTCA
AGTAAAAATGAAAAAGATAGTCGAGTTAGGCTTGAAAAGTTTTTGGAAGATTACAAGGCC
ATAAGACCAACAAGATATTCTTATGCTGATATTAAGAAGATAACAGATGGTTTCAATGAA
AAGTTAGGAGAAGGAAGTTATGGAACTGTTTACAAAGGCAAACTTTCCAGGGAAATCTAT
GTTGCTGTAAAAGTCCTACGCGATTCCAAGGGTAAAGGGGAAGAATTTATCAATGAAATC
GGAACAATTGGGAGAATCCACCATGTTAACGTGGTTCGCTTGGTTGGTTTTTGTGCTGAT
GGATTCAGACGAGCTTTGATCTATGAATACCTACCAAATGATTCACTTGAAAGATTCATT
TTGCCAATGAGCTCGAGCACGAATAGTGTTTCAGTCATCAGCTGGAATAAGCTTCAACAT
ATCGCTCTTGGTACTGCTAGAGGGATTGAATATCTTCACCAGGGATGTAATCAGCAGATT
CTTCATTTCGATATTAAACCACAAAACATCCTTTCAGACCATAATTTGAACCCAAAAATT
TGCGATTTTGGCCTAGCTAAACTGTGCTCGAAAGAAAAAAGTGCAGTCACAATGACAGCT
GCTAGGGGAACCATAGGCTACATTGCACCAGAAGTGTTATCAAGAAACTTTGGTAAGGTT
TCTCATAAATCTGATATTTATAGTTTCGGAATGCTCTTGTTAGAAATGGTTGGAGGGAGG
ATAAAGTCGAATTCTAAGACGAATAATCACAACAAAATAAGTTCTTTGGAATGGATATAT
GGAGATTTGGAGAAGGGGGAAGAATTGAAGATTCGGATAGAGGAAGAAGGAGATGGTACA
ATTGTGAGAAAGTTAGCCATTGTTGGACTTTGGTGTATTCAGTGGCATCCAAATGATAGG
CCTTCAATAAAAGAAGTCGTTCAGATGCTAGAAGGAGATGGGAGCCATCTCAACTTGTCC
CCAAATCCTTTTATGGCTACTAATATGCCTAATTTTAATGCAAGTCCTCATGAAGAAGAT
CTAGACGTTATATTAGAAATTGAATAA

Peptide Sequence

PEP ID

XP_016512356.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like [Nicotiana tabacum]
Sequence

MLSKSLVRVLEMSIFTSLLFFLVFCPLLSLGDRLEGCEDSWCKNDGPIIHFPFRLRNQPK
HCGYPGFELQCNNQKDTILELPFSVHFIVEEIDYISQQIHLYDPNECIIAKLSKLNLSQS
NFKNVEDPTALFNCSVPYDYGIVVPCLGSSGYQVYAVSPTIILHLFLTGPCTKIHQYPYS
QSTFLENRLQLNWPVPLCGNCESNGMDCGFMDRTKLLETHCFNRTMTQKGITKQPLVAGV
ILGAALVCIIIFSFHQLYLSSKNEKDSRVRLEKFLEDYKAIRPTRYSYADIKKITDGFNE
KLGEGSYGTVYKGKLSREIYVAVKVLRDSKGKGEEFINEIGTIGRIHHVNVVRLVGFCAD
GFRRALIYEYLPNDSLERFILPMSSSTNSVSVISWNKLQHIALGTARGIEYLHQGCNQQI
LHFDIKPQNILSDHNLNPKICDFGLAKLCSKEKSAVTMTAARGTIGYIAPEVLSRNFGKV
SHKSDIYSFGMLLLEMVGGRIKSNSKTNNHNKISSLEWIYGDLEKGEELKIRIEEEGDGT
IVRKLAIVGLWCIQWHPNDRPSIKEVVQMLEGDGSHLNLSPNPFMATNMPNFNASPHEED
LDVILEIE

Transcript Sequence

Gene sequence data has not been registered.